What is Experimental Autoimmune Encephalomyelitis (EAE)?
Experimental autoimmune encephalomyelitis (EAE) is the most widely used preclinical model system for multiple sclerosis (MS), neuromyelitis optica spectrum disorder (NMOSD), and MOG-antibody-associated disorder (MOGAD). Unlike the disease entities themselves, EAE is an induction-defined model: disease is triggered by active immunisation with myelin-derived peptides (such as MOG35-55 or PLP139-151) or by passive transfer of pathogenic antibodies (MOG-IgG, AQP4-IgG), with the variant chosen to match the research question: T cell-driven demyelination, B cell/antibody-mediated pathology, relapsing-remitting course, or primary progressive disease. Each variant produces a distinct pathological signature in the spinal cord, brain, and optic nerve, with correspondingly distinct visual functional consequences measurable by automated optomotor testing.
This page focuses specifically on EAE as a model system, including variant selection, induction protocols, visual endpoint timing, immunological mechanisms, and translational benchmarking applications. For the corresponding clinical context, see Multiple Sclerosis and Autoimmune Demyelinating Diseases.
The model is closely associated with Optic Neuritis as a key optic nerve and retinal consequence. It also links mechanistically to both Neuroinflammation and Autoimmune CNS Disease and Ocular Inflammation and Immune-Mediated Eye Disease, which addresses the ocular-specific consequences of systemic and CNS autoimmune processes.
Why Vision? EAE as a CNS Model with Ocular Consequences
Functionally, the optomotor reflex (OMR) is a subcortical reflex mediated by the accessory optic system and nucleus of the optic tract that captures the integrated output of retinal circuitry and optic nerve conduction. Because the OMR requires no training, anaesthesia, or surgical preparation, it can be measured repeatedly across the full EAE time course – from before immunisation through peak disease and into the chronic or remitting phase – in the same animals used for motor scoring. This temporal pairing of visual and motor endpoints in the same cohort substantially increases statistical power and reduces animal numbers (3Rs). For researchers benchmarking disease-modifying therapies, the OMR provides a non-invasive, sensitive functional readout that is directly analogous to the visual evoked potential (VEP) and optotype acuity endpoints used in MS clinical trials.
Common EAE Model Variants Used for Visual Endpoint Research
- MOG35-55 EAE (C57BL/6 mouse): The most widely replicated EAE variant. Subcutaneous immunisation with MOG peptide 35-55 emulsified in complete Freund's adjuvant (CFA) with pertussis toxin co-injection produces ascending paralysis peaking around day 14-21 post-immunisation, with spinal cord and optic nerve demyelination. Visual acuity and contrast sensitivity decline is detectable by OptoDrum from peak motor disease through the chronic phase, reflecting optic nerve demyelination and progressive RGC loss. The monophasic course in C57BL/6 mice supports clean single-episode intervention studies. (Capper et al., 2025, Front Immunol. | Morin et al., 2021, J Immunol. )
- B cell-dependent EAE with anti-MOG antibody responses (C57BL/6 or humanised variants): Immunisation protocols incorporating anti-MOG antibodies or B cell- stimulating adjuvants produce a humoral immune component alongside T cell-driven inflammation, more closely recapitulating MOGAD pathology. Complement-mediated demyelination and a distinct optic neuritis profile distinguish this variant from canonical T cell-driven EAE, and OptoDrum captures the corresponding differences in functional visual trajectory. (Joly et al., 2022, J Neuroinflammation.)
- MOGAD and NMOSD models (MOG-IgG and AQP4-IgG passive transfer): Passive transfer of human MOG-IgG or AQP4-IgG into rodents with an adjuvant optic nerve inflammatory trigger produces a severe, rapidly evolving optic neuritis that is distinct from EAE in its severity and the poor visual recovery that follows. OptoDrum has been used to document the functional visual phenotype of these disease-specific variants, establishing a benchmark against which disease-modifying therapies for NMOSD and MOGAD can be tested. (Remlinger et al., 2023, Neurol Neuroimmunol Neuroinflamm. | Remlinger et al., 2022, Neurol Neuroimmunol Neuroinflamm.)
- Conditional immune gene knockout EAE (C57BL/6; histamine signalling knockouts): Cell-specific conditional deletion of histidine decarboxylase (Hdc) in different immune compartments creates mechanistically refined EAE variants for dissecting the role of specific immune mediators. OptoDrum quantifies the functional visual consequences of these genetic immunological manipulations with sufficient sensitivity to detect between-genotype differences in visual outcome. (Morin et al., 2021, J. Immunol.)
- Dietary and environmental modulation of MOG35-55 EAE (C57BL/6): High-saturated, long-chain fatty acid dietary regimens exacerbate EAE severity and visual pathway damage without altering the induction protocol. This variant demonstrates that environmental variables measurably shift OptoDrum-quantifiable visual outcomes, making it particularly relevant for studies examining diet-microbiome-neuroinflammation interactions in MS-relevant models. (Capper et al., 2025, Front. Immunol.)
How Can Striatech Tools support Your Study?
01Which EAE Variant Best Models MS vs NMOSD vs MOGAD, and How Does the Visual Phenotype Differ?Audience A - Vision-focusedAudience B - CNS/Systemic
Quick Answer
- MOG35-55/C57BL/6 EAE models T cell-driven MS with a monophasic visual acuity decline that partially recovers in some animals
- PLP139-151/ SJL/J EAE produces relapsing-remitting optic neuritis best captured by longitudinal OptoDrum tracking
- B cell-dependent and MOG-IgG/AQP4-IgG passive transfer models produce the more severe, less remitting optic neuritis of MOGAD/NMOSD, with an OptoDrum functional profile that is diagnostically distinguishable from T cell-driven EAE
The challenge
MS, NMOSD, and MOGAD are distinct diseases with different pathological substrates, clinical courses, and treatment responses. Preclinical researchers need to select the EAE variant that best recapitulates the disease mechanism under investigation – T cell-mediated demyelination, astrocytopathy driven by AQP4-IgG, or complement-mediated axon attack driven by MOG-IgG – and then confirm that the chosen variant produces the expected visual phenotype. Mismatched model selection is a leading cause of failed translational predictions.
Classical motor scoring (Expanded Disability Status Scale analogues) does not disambiguate between these variants because all produce ascending paralysis. The visual pathway provides a complementary readout that more directly reflects optic nerve involvement, which varies markedly between variants. AQP4-IgG NMOSD models, for example, produce catastrophic optic nerve destruction with near-total OMR loss and minimal recovery, whereas T cell-driven EAE produces a partial, fluctuating deficit. Capturing this distinction non-invasively and longitudinally requires an endpoint that is repeatable across weeks without sacrifice.
Also see: Multiple Sclerosis, Autoimmune Demyelinating Diseases and Axon Degeneration.How Striatech products help
Evidence from the Literature
- Developed and characterised rodent models for NMOSD and MOGAD using OptoDrum to document the distinct pattern of visual pathway dysfunction produced by AQP4-IgG and MOG-IgG-mediated attack. The functional visual profile was demonstrably different from classical T cell-driven EAE, establishing OptoDrum as the discriminating endpoint between autoimmune demyelinating disease models.
- Characterised a B cell-dependent EAE variant in which MOG antibody responses drive demyelination alongside T cell-mediated inflammation. OptoDrum documented the functional visual consequence of this antibody-mediated optic nerve attack, providing evidence that the B cell/MOG-IgG arm of EAE produces a visual dysfunction profile distinct from canonical CD4+ T cell-driven disease.
02When Do EAE Visual Deficits Emerge Relative to Motor Scoring, and Can OMR Testing Precede or Supplement the Clinical EAE Score?Audience A - Vision-focusedAudience B - CNS/Systemic
Quick Answer
The challenge
The standard EAE clinical score (0-5 ascending paralysis scale) captures motor output but provides no information about cranial nerve involvement, optic neuritis severity, or the functional status of the retino-brainstem visual pathway. Motor score and visual function are partially dissociated: an animal scoring 2-3 on the motor scale may have near-normal vision or severe optic neuritis depending on the optic nerve involvement in that individual, which varies even within inbred strains.
Researchers optimising treatment windows need to know whether visual deficits precede, coincide with, or lag behind motor symptom onset. If visual deficits emerge early – potentially reflecting subclinical optic nerve inflammation before motor paralysis – OMR testing could serve as an early warning endpoint. If they persist after motor recovery, they capture the residual neurological damage most relevant to chronic disease staging. Both dynamics have direct translational relevance to clinical VEP prolongation in MS.
Conventionally, characterising the visual phenotype required ERG or histological RGC counts, both of which are terminal or require anaesthesia and provide only a single time point per animal. Repeated longitudinal visual function testing in the same EAE cohort, without anaesthesia or surgery, was not practically achievable before automated OMR platforms.
Also see: Neuroinflammation
How Striatech products help
Evidence from the Literature
- Demonstrated that dietary fat composition measurably shifts visual function outcomes in EAE, with OptoDrum detecting between-group differences in visual acuity and contrast sensitivity at multiple time points across the disease course. The study validates OptoDrum sensitivity to environmental modulators of EAE severity, confirming that even moderate disease-course changes are captured functionally.
- Used conditional Hdc knockouts to demonstrate that histaminergic immune modulation alters EAE severity and visual pathway functional outcomes. OptoDrum measured the functional visual consequences of these cell-specific immune manipulations, establishing that neuroimmune mediator changes produce OMR-detectable differences in visual function.
03B Cell vs T Cell EAE: What Are the Distinct Immunological Mechanisms and Visual Signatures?Audience A - Vision-focusedAudience B - CNS/Systemic
Quick Answer
The challenge
MS treatment has been transformed by anti-CD20 therapies (ocrelizumab, ofatumumab) that deplete B cells, reducing relapse rates in both relapsing-remitting and primary progressive MS. Yet the standard EAE model used in most preclinical laboratories is a T cell-driven model that lacks the humoral immune component. Preclinical evaluation of B cell-targeted therapies in a B cell- dependent EAE model with a validated visual endpoint would provide a more mechanistically faithful translational platform.
B cells contribute to MS and MOGAD pathology through several non-redundant mechanisms: as antigen-presenting cells that license autoreactive T cells, as producers of MOG-specific and AQP4- specific antibodies that engage complement at the node of Ranvier and at astrocytic endfeet, and as sources of pro-inflammatory cytokines (GM-CSF, IL-6) that amplify local inflammation. Each mechanism has a different downstream effect on the optic nerve and retina, and the functional visual trajectory differs accordingly. Without a validated functional endpoint, researchers cannot determine whether a B cell-targeting intervention is reducing the T cell licensing arm, the antibody-mediated arm, or both.
Also see: Optic Nerve Damage, Retinal Ganglion Cell Pathology and Optic Neuritis.
How Striatech products help
Evidence from the Literature
- Characterised a B cell-dependent EAE model incorporating MOG-specific antibody responses. OptoDrum measured visual acuity and contrast sensitivity to document that B cell/antibody-driven EAE produces optic neuritis and RGC death with a functional visual profile distinguishable from classical CD4+ T cell-driven disease. The study establishes a functional visual benchmark for evaluating B cell-targeted therapies – including anti-CD20 monoclonals – in this model.
04Disease-Modifying Therapy Benchmarking in EAE Using Visual Endpoints: What Can OptoDrum Detect?Audience A - Vision-focused
Quick Answer
The challenge
Motor scoring is the standard readout for EAE therapy studies, but it has well-documented limitations as a translational endpoint: it is categorical, subject to inter-rater variability, and does not map cleanly onto the patient-relevant outcomes used in MS clinical trials (such as relapse rate, VEP latency, optical coherence tomography retinal nerve fibre layer thickness, or Expanded Disability Status Scale). The visual pathway provides a set of endpoints – functional acuity, contrast sensitivity, optic nerve conduction – that more directly parallel the clinical outcome measures used in MS trials, strengthening the translational argument for preclinical efficacy data.
Beyond the translational alignment argument, visual endpoints offer a practical advantage: they are continuously measurable in the same animals used for motor scoring, without adding cohorts or terminal procedures. This allows researchers to establish an intervention's functional efficacy profile across the full treatment window – whether a compound prevents the initial deficit, promotes recovery during remission, or slows progression in the chronic phase – rather than capturing only a single post-treatment time point at sacrifice.
Also see: Retinal Ganglion Cell Pathology
How Striatech products help
Evidence from the Literature
- Demonstrated that pharmacological inhibition of HIF-1 (hypoxia-inducible factor 1) with acriflavine preserves visual function in EAE by reducing optic nerve hypoxia-driven neuroinflammation. OptoDrum provided the primary functional efficacy endpoint, confirming that HIF-1 inhibition translates to retained optomotor visual acuity and reduced optic neuritis severity. This study represents a mechanistically novel DMT approach – targeting the metabolic-inflammatory interface rather than conventional immune cell depletion – validated with a visual function endpoint.
- Evaluated FcRn receptor blockade as a strategy to reduce circulating MOG antibody titres and attenuate EAE/MOGAD-related optic neuritis. FcRn blockade is a clinically advanced therapeutic strategy already in use for other antibody-driven diseases (myasthenia gravis, NMOSD). OptoDrum measured visual acuity as the functional confirmation that antibody reduction via FcRn blockade translates to preserved visual pathway integrity.
05Chronic Progressive vs Relapsing EAE: How Do OMR Longitudinal Trajectories Differ, and What Does This Mean for Endpoint Planning?Audience A - Vision-focusedAudience B - CNS/Systemic
Quick Answer
The challenge
Endpoint planning for EAE therapy studies requires knowledge of the expected visual function trajectory for the chosen model variant. A compound evaluated in a relapsing model must be sampled frequently enough to capture peak deficit during relapses and partial recovery between attacks; a compound evaluated in a chronic progressive model must be sampled over a long enough window to detect rate-of-decline differences between treatment groups. Using the wrong sampling frequency or study duration for the disease course produces underpowered studies with inconclusive functional endpoints.
The relapsing-remitting vs chronic progressive distinction also maps differently onto clinical endpoints. Relapsing EAE visual function data most directly parallels the episodic VEP changes seen during MS clinical relapses, while chronic progressive EAE OMR trajectories better model the progressive retinal nerve fibre layer thinning and sustained VEP latency prolongation seen in secondary progressive MS and NMOSD. Aligning the preclinical endpoint strategy with the clinical measurement precedent strengthens the translational argument for regulatory submissions.
Also see: Neuroinflammation and Optic Nerve Damage
How Striatech products help
Evidence from the Literature
- Establishes the longitudinal optomotor endpoint profile, measured with OptoDrum, across multiple EAE variants.
- Longitudinal OMR data (using OptoDrum) in MOG35-55/C57BL/6 EAE is provided under different modulating conditions (dietary and immunological), establishing the expected deficit trajectory and its sensitivity to between-group differences.
- Documents the more severe and persistent OMR trajectory (measured with OptoDrum) of NMOSD/MOGAD passive transfer variants, providing the comparative benchmark for chronic non-remitting disease modelling.
Summary: Striatech Products supporting your research questions
| Research Question | OptoDrum | ScotopicKit | AcuiSee | Photorefractor | Keratometer | DarkAdapt | Non-aversive platform |
|---|---|---|---|---|---|---|---|
| Variant selection (MS vs NMOSD vs MOGAD) | Yes | Yes | Yes | ||||
| Visual onset timing vs motor score | Yes | Yes | Yes | Yes | |||
| B cell vs T cell mechanisms | Yes | Yes | Yes | ||||
| DMT benchmarking | Yes | Yes | Yes | ||||
| Longitudinal trajectories | Yes | Yes | Yes | Yes |
Measuring Functional Visual Outcomes in Experimental Autoimmune Encephalomyelitis (EAE): How Do Available Methods Compare?
| Modality | Invasiveness | Repeatable longitudinally | Training required | Automation | Endpoint type | Translational analogue |
|---|---|---|---|---|---|---|
| OptoDrum (OMR) | None | Yes – weekly or more frequent | None | Fully automated | Subcortical functional acuity and contrast sensitivity | VEP acuity component; psychophysical optotype acuity |
| AcuiSee (operant) | None | Yes | Operant shaping (days to weeks) | Automated reward delivery | Cortical visual acuity | Clinical optotype visual acuity (ETDRS) |
| VEP (flash or pattern) | Requires anaesthesia or chronic electrode implant | Limited by anaesthesia / electrode welfare | Moderate (electrode preparation) | Semi-automated | Cortical evoked potential; latency and amplitude | Clinical VEP (direct equivalent) |
| ERG | Requires anaesthesia | Limited by anaesthesia | Moderate | Semi-automated | Retinal photoreceptor and inner nuclear layer function | Clinical full-field ERG |
| RGC histology / OCT | Terminal (histology); non-invasive (OCT) | OCT: yes; histology: no | High (histology); moderate (OCT) | Semi-automated (OCT) | Structural cell count / layer thickness | Clinical OCT retinal nerve fibre layer |
| Motor EAE score | None (observation) | Yes – daily | None | Not automated (observer-rated) | Motor disability | EDSS (partial analogue) |
Publications on Experimental Autoimmune Encephalomyelitis (EAE)
Journal Clubs related to Experimental Autoimmune Encephalomyelitis (EAE)
Journal Club: In Vivo Modeling of Immune-mediated Optic Neuropathies
- Related Products:
- OptoDrum
Journal Club: Anti-FcRn Treatment in Antibody-Associated Experimental Autoimmune Encephalomyelitis
- Related Products:
- OptoDrum
Related application areas, neighbouring research chapters, and the questions researchers ask most.
Experimental Autoimmune Encephalomyelitis (EAE)
EAE is the principal rodent paradigm for multiple sclerosis. Model variants (MOG, PLP, B-cell-dependent, passive transfer) differ in disease course and visual phenotype, with optic neuritis as a near-universal feature.
This page has been generated in part with support of AI. Before publication it has been reviewed by a Striatech editor.
Last updated: 15 July 2026